Presentation and example code for the Helmholtz Chromatin Summer School 2022

This script(s) aim to have a tool to visualize and process Quantitative Phase Imaging (QPI) files. Link to Testfile(s) "Hela.tiff" "First Frame.tiff", "CleanerImage,tiff": https://hmgubox2.helmholtz-muenchen.de/index.php/s/rPwDQrjxJoE8CcH

Tutorial for Snakemake

Pipeline for processing general ChIP-Seq, ATAC-Seq, CUT&RUN/CUT&TAG datasets.

architecture surgery and transfer learning for single-cell