... | ... | @@ -29,8 +29,9 @@ BiocManager::install(c("ChIPseeker", "GenomicRanges", "rtracklayer", "TxDb.Hsapi |
|
|
|
|
|
### Wednesday
|
|
|
* 09:00 Introduction
|
|
|
* Introduction to [Reproducibility](https://ascgitlab.helmholtz-muenchen.de/chromatin_summer_school_2022/presentations/reproducibility_intro/-/blob/main/Reproducibility_Intro.pdf)
|
|
|
* [Workflow management](https://ascgitlab.helmholtz-muenchen.de/chromatin_summer_school_2022/workflows/snakemake-ngs-processing)
|
|
|
* [Reproducible Research](https://ascgitlab.helmholtz-muenchen.de/chromatin_summer_school_2022/presentations/reproducibility_intro/-/blob/main/Reproducibility_Intro.pdf)
|
|
|
* Introduction to SLURM and HPC
|
|
|
* 11:00 [Snakemake Workflow](https://ascgitlab.helmholtz-muenchen.de/chromatin_summer_school_2022/workflows/snakemake-ngs-processing)
|
|
|
* 13:00 Lunch
|
|
|
* 14:00 External seminar
|
|
|
* 15:00 [Data processing I](https://ascgitlab.helmholtz-muenchen.de/chromatin_summer_school_2022/workshops/data_processing_1)
|
... | ... | |